STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0G766_9BRASPHD-type domain-containing protein. (246 aa)    
Predicted Functional Partners:
R0GLL7_9BRAS
RING-type domain-containing protein.
   
 
 0.972
R0GX91_9BRAS
RING-type domain-containing protein.
   
   0.958
R0FY22_9BRAS
Uncharacterized protein; Belongs to the adenylate kinase family.
      
 0.881
R0GVR4_9BRAS
PfkB domain-containing protein.
      
 0.846
R0GM59_9BRAS
B30.2/SPRY domain-containing protein.
   
 
 0.766
R0HXN1_9BRAS
WD_REPEATS_REGION domain-containing protein.
    
 
 0.756
R0F5Q7_9BRAS
Uncharacterized protein.
    
 
 0.747
R0G6B7_9BRAS
PfkB domain-containing protein.
      
 0.724
R0FMQ2_9BRAS
Non-specific serine/threonine protein kinase.
      
 0.719
R0HWP9_9BRAS
Uncharacterized protein.
    
 
 0.714
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.