STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GA93_9BRASUncharacterized protein. (439 aa)    
Predicted Functional Partners:
R0GGE2_9BRAS
Uncharacterized protein.
      
 0.549
R0IL06_9BRAS
Uncharacterized protein.
      
 0.475
R0EYR7_9BRAS
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.474
R0F5W1_9BRAS
Uncharacterized protein.
      
 0.474
R0H8K4_9BRAS
Thioredoxin; Belongs to the thioredoxin family.
      
 0.474
R0GU35_9BRAS
DUF4378 domain-containing protein.
      
 0.473
R0H179_9BRAS
PNP_UDP_1 domain-containing protein.
      
 0.473
R0H2R3_9BRAS
PNP_UDP_1 domain-containing protein.
      
 0.473
R0HXX3_9BRAS
Uncharacterized protein.
      
 0.473
R0HHC3_9BRAS
TPT domain-containing protein.
      
 0.461
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.