STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GBH3_9BRASUncharacterized protein. (217 aa)    
Predicted Functional Partners:
R0GSG1_9BRAS
Uncharacterized protein.
      
 0.943
R0GQY8_9BRAS
AvrRpt-cleavage domain-containing protein.
      
 0.841
R0F992_9BRAS
AvrRpt-cleavage domain-containing protein.
      
 0.760
R0GJJ3_9BRAS
NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.
    
 
 0.706
R0GJ21_9BRAS
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
      
 0.418
R0GJ40_9BRAS
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
      
 0.418
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.