STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GGU2_9BRASUncharacterized protein. (491 aa)    
Predicted Functional Partners:
R0G6F6_9BRAS
Uncharacterized protein.
      
 0.754
R0H1C9_9BRAS
Uncharacterized protein.
      
 0.754
R0FQ40_9BRAS
Uncharacterized protein.
      
 0.710
R0ILJ1_9BRAS
MSP domain-containing protein.
      
 0.702
R0HEI0_9BRAS
Uncharacterized protein.
    
  0.685
R0GU26_9BRAS
Ubiquitin-like domain-containing protein.
    
  0.598
R0H9G6_9BRAS
Ubiquitin-like domain-containing protein.
    
  0.598
R0HUN2_9BRAS
Ubiquitin-like domain-containing protein.
    
  0.598
R0GKA8_9BRAS
Uncharacterized protein.
      
 0.576
R0H097_9BRAS
WAT1-related protein.
      
 0.558
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.