STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GHW2_9BRASUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (364 aa)    
Predicted Functional Partners:
R0F3M5_9BRAS
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
 0.974
R0HXZ5_9BRAS
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
     
 0.957
R0II83_9BRAS
Epimerase domain-containing protein.
   
 
 0.919
R0GI53_9BRAS
Epimerase domain-containing protein.
   
 
 0.910
R0G4J5_9BRAS
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
     
 0.903
R0IRX0_9BRAS
Uncharacterized protein.
   
 
 0.901
R0H0B8_9BRAS
PKS_ER domain-containing protein.
   
 
 0.890
R0HKN3_9BRAS
Uncharacterized protein.
   
 
 0.885
R0I1F1_9BRAS
Uncharacterized protein.
   
 
 0.885
R0GGZ2_9BRAS
Uncharacterized protein.
     
 0.882
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.