STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GIC4_9BRASRING-type domain-containing protein. (250 aa)    
Predicted Functional Partners:
R0HP55_9BRAS
RING-type domain-containing protein.
  
   
 0.698
R0I2A1_9BRAS
Uncharacterized protein.
   
  
 0.573
R0IIH1_9BRAS
Uncharacterized protein.
   
  
 0.556
R0FCZ8_9BRAS
PH domain-containing protein.
     
 0.548
R0F545_9BRAS
Uncharacterized protein.
   
  
 0.514
R0HRW6_9BRAS
Uncharacterized protein.
   
 
 0.512
R0FBN1_9BRAS
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.508
R0HR93_9BRAS
Uncharacterized protein.
   
  
 0.506
R0FRE6_9BRAS
Uncharacterized protein.
      
 0.489
R0HBJ2_9BRAS
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.483
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.