STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GJI6_9BRASAAA domain-containing protein. (867 aa)    
Predicted Functional Partners:
R0FWG7_9BRAS
Uncharacterized protein.
   
 0.998
R0GSA4_9BRAS
Uncharacterized protein.
   
 0.998
R0GHJ9_9BRAS
AAA domain-containing protein.
   
0.997
R0FFD6_9BRAS
AAA domain-containing protein.
   
 0.996
R0GHS5_9BRAS
AAA domain-containing protein.
   
0.992
R0H9W4_9BRAS
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
   
 
 0.985
R0GU64_9BRAS
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.980
R0HWU7_9BRAS
Helicase ATP-binding domain-containing protein.
   
 
 0.967
R0IL64_9BRAS
PCNA_C domain-containing protein.
   
 0.966
R0GEW9_9BRAS
Uncharacterized protein.
   
 0.961
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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