STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GKI2_9BRASDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1160 aa)    
Predicted Functional Partners:
R0GMD7_9BRAS
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 0.999
R0INT2_9BRAS
Uncharacterized protein.
   
 0.999
R0H454_9BRAS
Uncharacterized protein.
   
 0.998
R0GMS4_9BRAS
RNase H domain-containing protein.
   
 0.997
R0HML4_9BRAS
Uncharacterized protein.
   
 0.995
R0GHJ6_9BRAS
SANT domain-containing protein.
   
 0.994
R0FMZ6_9BRAS
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.993
R0GHJ5_9BRAS
RPOLD domain-containing protein.
  
 0.993
R0GWJ2_9BRAS
RPOLD domain-containing protein.
  
 0.993
R0FYL8_9BRAS
RNA_pol_L_2 domain-containing protein.
   
 0.991
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
Server load: low (24%) [HD]