STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GLM7_9BRASUncharacterized protein; Belongs to the peptidase C1 family. (511 aa)    
Predicted Functional Partners:
R0EXG4_9BRAS
Uncharacterized protein.
    
  0.976
R0GW74_9BRAS
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.919
R0H073_9BRAS
OBG-type G domain-containing protein.
    
   0.919
R0H9W4_9BRAS
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.919
R0INR0_9BRAS
Uncharacterized protein.
    
  0.905
R0I5U5_9BRAS
OBG-type G domain-containing protein.
    
   0.870
R0IDN2_9BRAS
OBG-type G domain-containing protein.
    
   0.870
R0FW37_9BRAS
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
   0.853
R0FXL1_9BRAS
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
   0.853
R0GS40_9BRAS
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
   0.853
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.