STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GLT5_9BRASSAICAR_synt domain-containing protein. (55 aa)    
Predicted Functional Partners:
R0GD19_9BRAS
Glutamine amidotransferase type-1 domain-containing protein.
  
 0.795
R0F3Z3_9BRAS
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 0.775
R0H8Z0_9BRAS
Uncharacterized protein.
  
 0.731
R0HU68_9BRAS
MGS domain-containing protein.
  
 
 0.672
R0INB0_9BRAS
ATP-grasp domain-containing protein.
  
 0.647
R0FBB5_9BRAS
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 0.600
R0G9M1_9BRAS
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 0.600
R0GYS5_9BRAS
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 0.600
R0GS06_9BRAS
Formyl_trans_N domain-containing protein.
  
 0.577
R0GVQ0_9BRAS
Formyl_trans_N domain-containing protein.
  
 0.577
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.