STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GM48_9BRASUncharacterized protein. (77 aa)    
Predicted Functional Partners:
R0H099_9BRAS
Uncharacterized protein; Belongs to the peptidase S8 family.
      
 0.895
R0HFU2_9BRAS
Uncharacterized protein.
      
 0.891
R0I295_9BRAS
Uncharacterized protein.
      
 0.809
R0I3A5_9BRAS
Uncharacterized protein.
      
 0.809
R0IKN3_9BRAS
Uncharacterized protein; Belongs to the peptidase C1 family.
      
 0.778
R0FPR1_9BRAS
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.775
R0I7T7_9BRAS
Knot1 domain-containing protein; Belongs to the DEFL family.
      
 0.751
R0HI69_9BRAS
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.661
R0I5E1_9BRAS
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.661
R0GNN8_9BRAS
Uncharacterized protein.
      
 0.521
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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