STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GQ59_9BRASUncharacterized protein. (366 aa)    
Predicted Functional Partners:
R0HFX8_9BRAS
Uncharacterized protein.
  
 
 
 0.846
TOP6B
DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family.
  
   
 0.840
TOP6A
DNA topoisomerase 6 subunit A; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity.
    
 
 0.827
R0GL99_9BRAS
Protein kinase domain-containing protein.
      
 0.773
R0GP87_9BRAS
Uncharacterized protein.
      
 0.713
R0GWG0_9BRAS
Uncharacterized protein.
      
 0.711
R0FS44_9BRAS
Uncharacterized protein.
      
 0.710
R0GY82_9BRAS
Uncharacterized protein.
      
 0.682
R0H0Q9_9BRAS
BHLH domain-containing protein.
      
 0.682
R0H316_9BRAS
CRAL-TRIO domain-containing protein.
      
 0.654
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
Server load: low (16%) [HD]