STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GRU6_9BRASTF-B3 domain-containing protein. (262 aa)    
Predicted Functional Partners:
R0HRU1_9BRAS
Uncharacterized protein.
   
 0.846
R0HM62_9BRAS
Uncharacterized protein.
   
 
 0.800
R0G2G3_9BRAS
Ribosomal_L18_c domain-containing protein.
   
 
 0.797
R0I5Z8_9BRAS
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 
 0.796
R0H937_9BRAS
Uncharacterized protein.
   
 
 0.788
R0GRK7_9BRAS
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.771
R0I1C5_9BRAS
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.771
R0G818_9BRAS
Uncharacterized protein.
   
 0.770
R0HDK4_9BRAS
Uncharacterized protein.
   
 0.770
R0HDE2_9BRAS
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 0.769
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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