STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GSI6_9BRASRRM domain-containing protein. (156 aa)    
Predicted Functional Partners:
R0G9P9_9BRAS
Uncharacterized protein.
    
  0.926
R0GTR5_9BRAS
Uncharacterized protein.
   
 
 0.887
R0GT56_9BRAS
WD_REPEATS_REGION domain-containing protein.
   
 
 0.797
R0F5Q7_9BRAS
Uncharacterized protein.
   
  
 0.794
R0FLQ7_9BRAS
DYW_deaminase domain-containing protein.
    
 
 0.774
R0GTZ0_9BRAS
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
      
 0.772
R0G695_9BRAS
Uncharacterized protein.
      
 0.760
R0G5C6_9BRAS
Uncharacterized protein.
    
 0.718
R0GLD6_9BRAS
DYW_deaminase domain-containing protein.
    
 
 0.713
R0GG31_9BRAS
DYW_deaminase domain-containing protein.
    
 
 0.705
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.