STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GX52_9BRASDCD domain-containing protein. (357 aa)    
Predicted Functional Partners:
R0FT72_9BRAS
Uncharacterized protein.
      
 0.772
R0IHM4_9BRAS
Uncharacterized protein.
   
  
 0.742
R0I058_9BRAS
PHB domain-containing protein.
   
  
 0.585
R0I4B1_9BRAS
PHB domain-containing protein.
   
  
 0.567
R0GN80_9BRAS
Uncharacterized protein.
  
  
 0.558
R0HIN5_9BRAS
UBX domain-containing protein.
      
 0.510
R0GLF9_9BRAS
Uncharacterized protein.
   
  
 0.485
R0HRG2_9BRAS
Uncharacterized protein.
   
  
 0.485
R0F9M7_9BRAS
NAC domain-containing protein.
      
 0.482
R0G8E7_9BRAS
Uncharacterized protein.
      
 0.480
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.