STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GXC8_9BRASF-box domain-containing protein. (434 aa)    
Predicted Functional Partners:
R0GE59_9BRAS
Uncharacterized protein.
      
 0.910
R0GVE0_9BRAS
Uncharacterized protein.
      
 0.883
R0GTF6_9BRAS
F-box domain-containing protein.
      
 0.879
B2BXX3_9BRAS
PWI domain-containing protein.
      
 0.772
R0ICR2_9BRAS
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.772
R0GCQ6_9BRAS
Uncharacterized protein.
      
 0.760
R0IKN4_9BRAS
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.760
R0GWV3_9BRAS
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.748
R0IIZ5_9BRAS
Uncharacterized protein.
      
 0.732
R0H1K5_9BRAS
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.702
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.