STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GXR1_9BRASDNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1182 aa)    
Predicted Functional Partners:
R0G3A0_9BRAS
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.999
R0GT55_9BRAS
DNA_mis_repair domain-containing protein.
 
 0.997
R0F8F2_9BRAS
Uncharacterized protein.
 
 0.988
R0H5A9_9BRAS
Uncharacterized protein.
 
 0.987
R0I3X2_9BRAS
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
0.987
R0GVB6_9BRAS
Uncharacterized protein.
   
 0.941
R0FCI0_9BRAS
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 
 
0.936
R0HUD5_9BRAS
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.932
R0HYZ2_9BRAS
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.932
R0IL64_9BRAS
PCNA_C domain-containing protein.
   
 0.914
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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