STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GYM8_9BRASFlavodoxin-like domain-containing protein. (212 aa)    
Predicted Functional Partners:
MENG
2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic; Involved in the biosynthesis of phylloquinone (vitamin K1). Methyltransferase required for the conversion of 2-phytyl-1,4-beta- naphthoquinol to phylloquinol.
     
  0.900
R0GZG8_9BRAS
Uncharacterized protein.
      
 0.700
R0H4M5_9BRAS
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
      
 0.684
R0IRH9_9BRAS
Nitroreductase domain-containing protein.
  
 
 0.677
R0H0Y8_9BRAS
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
   
  
 0.640
R0HNU5_9BRAS
Uncharacterized protein; Belongs to the DEAD box helicase family.
      
 0.541
R0F9A3_9BRAS
M20_dimer domain-containing protein.
  
  
 0.538
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
      
 0.521
R0G5U4_9BRAS
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
   
  
 0.521
R0HJ20_9BRAS
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
   
  
 0.521
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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