STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GYW6_9BRASUncharacterized protein. (548 aa)    
Predicted Functional Partners:
R0GLF6_9BRAS
Uncharacterized protein.
  
   
 0.888
R0GST5_9BRAS
Glycos_transf_1 domain-containing protein.
   
  
 0.879
R0IBK2_9BRAS
Uncharacterized protein.
  
   
 0.875
R0GT28_9BRAS
Uncharacterized protein.
  
   
 0.874
R0HUC7_9BRAS
Uncharacterized protein.
  
   
 0.872
R0GXF9_9BRAS
Uncharacterized protein.
  
   
 0.869
R0GQ37_9BRAS
Uncharacterized protein.
  
   
 0.845
R0HWJ5_9BRAS
Uncharacterized protein.
  
   
 0.802
R0GQA9_9BRAS
Uncharacterized protein.
  
   
 0.800
R0HYC1_9BRAS
Uncharacterized protein.
      
 0.795
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.