STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GZ33_9BRASProtein kinase domain-containing protein. (675 aa)    
Predicted Functional Partners:
R0HCR9_9BRAS
Uncharacterized protein.
      
 0.883
R0HF28_9BRAS
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.883
R0HAH1_9BRAS
Aa_trans domain-containing protein.
    
 
 0.852
R0I8M4_9BRAS
J domain-containing protein.
    
 
 0.831
R0G671_9BRAS
Uncharacterized protein.
    
 
 0.810
R0FD54_9BRAS
Uncharacterized protein.
      
 0.778
R0GPP0_9BRAS
Uncharacterized protein.
   
 
 0.753
R0HMC2_9BRAS
Uncharacterized protein.
   
 
 0.753
R0G9M4_9BRAS
Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
      
 0.711
R0GTL2_9BRAS
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.614
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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