STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GZ52_9BRASACB domain-containing protein. (668 aa)    
Predicted Functional Partners:
R0F7P3_9BRAS
ACB domain-containing protein.
    
 
0.911
R0GK23_9BRAS
ACB domain-containing protein.
    
 
0.910
R0EXG4_9BRAS
Uncharacterized protein.
    
   0.906
R0G9Z7_9BRAS
ANK_REP_REGION domain-containing protein.
    
 0.795
R0H5M5_9BRAS
Uncharacterized protein.
    
 0.795
R0HTD3_9BRAS
PGG domain-containing protein.
    
 0.795
R0HYH6_9BRAS
RING-type domain-containing protein.
      
 0.778
R0H755_9BRAS
Uncharacterized protein.
      
 0.772
R0HH07_9BRAS
S-acyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.760
R0EV76_9BRAS
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
    
   0.712
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.