STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0H1Y3_9BRASCASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (190 aa)    
Predicted Functional Partners:
R0HT74_9BRAS
PKS_AT domain-containing protein.
  
 0.948
R0GL54_9BRAS
Uncharacterized protein; Belongs to the complex I LYR family.
   
 0.944
R0GRX0_9BRAS
Uncharacterized protein.
   
 0.944
R0HPJ7_9BRAS
Uncharacterized protein.
   
 0.928
R0F3K6_9BRAS
Carrier domain-containing protein.
  
 0.922
R0I163_9BRAS
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.922
R0HL73_9BRAS
Uncharacterized protein.
   
 0.919
R0G711_9BRAS
L51_S25_CI-B8 domain-containing protein.
   
 0.918
R0EYY2_9BRAS
Uncharacterized protein.
   
 0.917
R0FHI4_9BRAS
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
   
 0.916
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.