STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0H391_9BRASTPR_REGION domain-containing protein. (560 aa)    
Predicted Functional Partners:
R0I0N8_9BRAS
Uncharacterized protein.
  
     0.506
R0G9D6_9BRAS
Uncharacterized protein.
  
     0.503
R0HVL3_9BRAS
Uncharacterized protein.
  
     0.498
R0I1N1_9BRAS
Uncharacterized protein.
  
     0.498
R0H2E7_9BRAS
Uncharacterized protein.
  
     0.492
R0GA89_9BRAS
AAI domain-containing protein.
  
     0.489
R0GP37_9BRAS
AAI domain-containing protein.
  
     0.487
R0GSU2_9BRAS
Uncharacterized protein.
  
     0.486
R0H287_9BRAS
Uncharacterized protein.
  
     0.481
R0H9B8_9BRAS
Uncharacterized protein.
  
     0.481
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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