STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HAL4_9BRASUncharacterized protein. (777 aa)    
Predicted Functional Partners:
R0GMF9_9BRAS
Uncharacterized protein.
   
 
 0.750
R0EX68_9BRAS
RRM domain-containing protein.
   
 
 0.703
R0H701_9BRAS
Uncharacterized protein.
   
 
 0.678
R0H4G7_9BRAS
Uncharacterized protein.
      
 0.674
R0F3P8_9BRAS
Uncharacterized protein.
      
 0.667
R0GY08_9BRAS
GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
      
 0.667
R0H2Y0_9BRAS
Uncharacterized protein.
   
 
 0.633
R0H2B1_9BRAS
WD_REPEATS_REGION domain-containing protein.
      
 0.620
R0FTX4_9BRAS
Uncharacterized protein.
      
 0.618
R0INU5_9BRAS
Uncharacterized protein.
      
 0.618
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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