STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HB26_9BRASDUF1336 domain-containing protein. (287 aa)    
Predicted Functional Partners:
R0GXW0_9BRAS
Uncharacterized protein.
      
 0.947
R0H3T6_9BRAS
DAGKc domain-containing protein.
   
  
 0.864
R0FCI4_9BRAS
Uncharacterized protein.
      
 0.854
R0GRC0_9BRAS
TPR_REGION domain-containing protein.
      
 0.847
R0HBK1_9BRAS
Uncharacterized protein.
      
 0.732
R0GTL3_9BRAS
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
      
 0.731
R0GXG9_9BRAS
Uncharacterized protein; Belongs to the actin family.
      
 0.483
R0FNW6_9BRAS
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
      
 0.469
R0GYP4_9BRAS
Uncharacterized protein.
  
     0.427
R0I2P7_9BRAS
Uncharacterized protein.
  
     0.407
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.