STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HHU4_9BRASHexosyltransferase; Belongs to the glycosyltransferase 8 family. (444 aa)    
Predicted Functional Partners:
R0F185_9BRAS
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
      
 0.676
R0HF92_9BRAS
Pectinesterase.
      
 0.618
R0GT02_9BRAS
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.588
R0GAL9_9BRAS
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.561
R0HSB3_9BRAS
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
      
 0.556
R0EW56_9BRAS
Methyltransferase.
    
 
 0.479
R0F3H7_9BRAS
Methyltransferase.
    
 
 0.479
R0FDM0_9BRAS
PMEI domain-containing protein; In the C-terminal section; belongs to the pectinesterase family.
      
 0.473
R0GSE0_9BRAS
Uncharacterized protein.
      
 0.473
R0H219_9BRAS
Pribosyltran domain-containing protein.
      
 0.473
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.