STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HPZ7_9BRASUncharacterized protein; Belongs to the peptidase C1 family. (367 aa)    
Predicted Functional Partners:
R0EUJ3_9BRAS
WRKY domain-containing protein.
   
  0.904
R0EXG4_9BRAS
Uncharacterized protein.
    
  0.832
R0I5B3_9BRAS
Uncharacterized protein.
      
 0.760
R0EV76_9BRAS
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
0.726
R0GJD5_9BRAS
Uncharacterized protein.
   
  
 0.717
R0HUX2_9BRAS
Uncharacterized protein.
     
 0.711
R0HLI8_9BRAS
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.704
R0ICT7_9BRAS
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.704
R0GLM7_9BRAS
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.703
R0GWJ1_9BRAS
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.703
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.