STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HQL6_9BRASUncharacterized protein. (693 aa)    
Predicted Functional Partners:
R0FGE3_9BRAS
LRAT domain-containing protein.
    
 0.704
R0HD41_9BRAS
Uncharacterized protein.
    
 
 0.668
R0H8A8_9BRAS
Uncharacterized protein.
      
 0.665
R0HZ62_9BRAS
Methyltransferase.
    
 
 0.660
R0GHH4_9BRAS
F-box domain-containing protein.
      
 0.557
R0I8I3_9BRAS
PDZ_3 domain-containing protein.
     
 0.555
R0F3D3_9BRAS
Uncharacterized protein.
   
  
 0.551
R0H549_9BRAS
Cation_ATPase_N domain-containing protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
    
 
 0.550
R0GHV5_9BRAS
Uncharacterized protein.
   
  
 0.545
R0HC39_9BRAS
Dof-type domain-containing protein.
      
 0.542
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.