STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HQN5_9BRASUncharacterized protein; Belongs to the peptidase M24B family. (708 aa)    
Predicted Functional Partners:
R0F334_9BRAS
Uncharacterized protein.
      
 0.760
R0HP97_9BRAS
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 
 0.709
R0HA55_9BRAS
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 
 0.708
R0F8X8_9BRAS
Uncharacterized protein; Belongs to the peptidase M24B family.
  
 
  
0.701
R0IHU4_9BRAS
Hydrolase_4 domain-containing protein.
     
 0.690
R0GNL4_9BRAS
Uncharacterized protein.
      
 0.688
R0EV27_9BRAS
Uncharacterized protein; Belongs to the peptidase S8 family.
     
 0.683
R0G6E3_9BRAS
Protein kinase domain-containing protein.
     
 0.667
R0HBW9_9BRAS
MPN domain-containing protein.
   
 
 0.662
R0G9S6_9BRAS
DAO domain-containing protein.
  
 0.594
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.