STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HR87_9BRASUncharacterized protein. (235 aa)    
Predicted Functional Partners:
R0GT88_9BRAS
Uncharacterized protein.
   
 0.987
R0IC55_9BRAS
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.987
R0IDM2_9BRAS
FCP1 homology domain-containing protein.
   
 0.978
R0I979_9BRAS
Uncharacterized protein.
   
 0.966
R0FG94_9BRAS
Uncharacterized protein.
   
 0.933
R0G0N6_9BRAS
Tim44 domain-containing protein.
   
 0.930
R0GAD2_9BRAS
Tim44 domain-containing protein.
   
 0.930
R0HS99_9BRAS
zf-Tim10_DDP domain-containing protein.
   
 
 0.911
R0IJF7_9BRAS
Uncharacterized protein.
   
 
 0.894
R0FZ42_9BRAS
Uncharacterized protein.
   
 
 0.883
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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