STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HSL3_9BRASUncharacterized protein. (461 aa)    
Predicted Functional Partners:
R0F1T5_9BRAS
Acetyltransf_11 domain-containing protein.
 
  
 0.972
R0F7Y0_9BRAS
Uncharacterized protein.
 
  
 0.962
R0I305_9BRAS
Uncharacterized protein.
  
   
 0.952
R0FEK8_9BRAS
Glycos_transf_N domain-containing protein.
  
   
 0.913
R0IG84_9BRAS
Phosphatidyl-N-methylethanolamine N-methyltransferase; Catalyzes the second two steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylmonomethylethanolamine (PMME) to phosphatidyldimethylethanolamine (PDME) and of PDME to phosphatidylcholine (PC).
      
 0.874
R0I9Z4_9BRAS
Uncharacterized protein.
      
 0.870
R0GWD8_9BRAS
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
  
  
 0.869
R0GU64_9BRAS
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 
 0.861
R0GQI1_9BRAS
Uncharacterized protein.
  
   
 0.844
R0HUD5_9BRAS
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.842
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.