STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HVB7_9BRASUncharacterized protein. (175 aa)    
Predicted Functional Partners:
R0INQ1_9BRAS
Uncharacterized protein.
      
 0.882
R0I9K0_9BRAS
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
    
 
 0.867
R0G9F9_9BRAS
Uncharacterized protein.
      
 0.862
R0HVJ9_9BRAS
Uncharacterized protein.
      
 0.800
R0F738_9BRAS
Uncharacterized protein.
      
 0.760
R0FCJ2_9BRAS
Uncharacterized protein.
      
 0.756
R0GMM0_9BRAS
Uncharacterized protein.
      
 0.709
R0IPF4_9BRAS
Uncharacterized protein.
      
 0.702
R0HF17_9BRAS
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
      
 0.576
R0FQR1_9BRAS
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.483
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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