STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0I1A2_9BRASSWIB domain-containing protein. (142 aa)    
Predicted Functional Partners:
R0GIE3_9BRAS
Uncharacterized protein.
   
  
 0.765
R0G6T8_9BRAS
Uncharacterized protein.
   
 0.757
R0GEK8_9BRAS
J domain-containing protein.
   
 0.757
R0H3E1_9BRAS
Uncharacterized protein; Belongs to the heat shock protein 70 family.
      
 0.735
R0F6T4_9BRAS
ANK_REP_REGION domain-containing protein.
    
 
 0.717
R0FJ74_9BRAS
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
      
 0.710
R0G5A1_9BRAS
BAF250_C domain-containing protein.
    
 0.624
R0GED2_9BRAS
ANK_REP_REGION domain-containing protein.
    
 
 0.579
R0HBA9_9BRAS
ANK_REP_REGION domain-containing protein.
    
 
 0.579
R0H4F8_9BRAS
Metallophos domain-containing protein.
      
 0.574
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.