STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0I4Q6_9BRASCAP-Gly domain-containing protein. (243 aa)    
Predicted Functional Partners:
R0FLS6_9BRAS
TFCD_C domain-containing protein.
    
 0.935
R0GH49_9BRAS
CAP-Gly domain-containing protein.
      
 0.852
R0HP77_9BRAS
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
  
 0.800
R0H054_9BRAS
Uncharacterized protein; Belongs to the GPN-loop GTPase family.
   
  
 0.718
R0HDD1_9BRAS
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
    0.678
R0GD77_9BRAS
TFCD_C domain-containing protein.
    
 0.596
R0GEE0_9BRAS
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
   
 0.592
R0GQ96_9BRAS
CMP/dCMP-type deaminase domain-containing protein.
      
 0.584
R0FHJ9_9BRAS
CS domain-containing protein.
   
 
 0.574
R0GSE6_9BRAS
Rab-GAP TBC domain-containing protein.
      
 0.574
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.