STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0I5N6_9BRASRRM domain-containing protein. (537 aa)    
Predicted Functional Partners:
R0GSU5_9BRAS
Uncharacterized protein.
      
 0.839
R0I3M7_9BRAS
RRM domain-containing protein.
      
 0.839
R0I7Y1_9BRAS
NGN domain-containing protein.
   
  
 0.803
R0HZZ0_9BRAS
KH domain-containing protein.
      
 0.778
R0H6B4_9BRAS
ABC1 domain-containing protein.
      
 0.772
R0HQ96_9BRAS
TPR_REGION domain-containing protein.
      
 0.771
R0IIF1_9BRAS
Uncharacterized protein.
      
 0.771
R0HEW9_9BRAS
DYW_deaminase domain-containing protein.
      
 0.769
R0GBD0_9BRAS
PPR_long domain-containing protein.
      
 0.760
R0GRG7_9BRAS
Uncharacterized protein.
      
 0.732
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.