STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0IAX8_9BRASbHLH-MYC_N domain-containing protein. (381 aa)    
Predicted Functional Partners:
R0IMI8_9BRAS
Abhydrolase_2 domain-containing protein.
      
 0.866
R0H662_9BRAS
Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.
      
 0.778
R0GBG4_9BRAS
CCT domain-containing protein.
      
 0.734
R0GPB1_9BRAS
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
      
 0.700
R0HUD9_9BRAS
Thioredoxin domain-containing protein.
      
 0.541
R0FM22_9BRAS
Uncharacterized protein.
  
     0.493
R0HA02_9BRAS
Uncharacterized protein.
  
     0.492
R0I4V0_9BRAS
Uncharacterized protein.
  
     0.489
R0GTQ7_9BRAS
Uncharacterized protein.
  
     0.488
R0GMQ1_9BRAS
PMR5N domain-containing protein.
  
     0.483
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.