STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0ICJ1_9BRASUncharacterized protein. (127 aa)    
Predicted Functional Partners:
R0HGC0_9BRAS
Uncharacterized protein.
  
     0.473
R0HWJ6_9BRAS
AAI domain-containing protein; Belongs to the plant LTP family.
  
     0.462
R0HJX8_9BRAS
Uncharacterized protein.
  
     0.461
R0FPX4_9BRAS
Uncharacterized protein.
  
     0.460
R0ID14_9BRAS
Uncharacterized protein.
  
    0.457
R0HFD0_9BRAS
Uncharacterized protein.
  
     0.452
R0I9K4_9BRAS
OVATE domain-containing protein.
  
     0.448
R0FNV4_9BRAS
Uncharacterized protein.
  
     0.434
R0FXS5_9BRAS
OVATE domain-containing protein.
  
     0.428
R0IPJ3_9BRAS
Terpene_synth_C domain-containing protein.
  
     0.420
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.