STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0ISS5_9BRASUncharacterized protein. (442 aa)    
Predicted Functional Partners:
R0GE86_9BRAS
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.974
R0IEJ1_9BRAS
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.968
R0G008_9BRAS
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
    
 0.966
R0FFK3_9BRAS
Uncharacterized protein; Belongs to the arginase family.
  
 
 0.925
R0H828_9BRAS
Uncharacterized protein; Belongs to the arginase family.
  
 
 0.925
R0F9A3_9BRAS
M20_dimer domain-containing protein.
     
 0.921
R0I2Y6_9BRAS
Semialdhyde_dh domain-containing protein.
  
 0.917
R0H315_9BRAS
Uncharacterized protein.
  
  
 
0.902
R0HT57_9BRAS
Uncharacterized protein.
  
  
 
0.902
R0GWK4_9BRAS
Uncharacterized protein.
  
  
 
0.900
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
Server load: low (16%) [HD]