STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HJU8_9BRASUncharacterized protein. (720 aa)    
Predicted Functional Partners:
R0FYS0_9BRAS
N-acetyltransferase domain-containing protein.
   
 0.993
R0GS09_9BRAS
N-acetyltransferase domain-containing protein.
   
 0.952
R0GB42_9BRAS
Sm domain-containing protein.
    
 0.899
R0H1C5_9BRAS
Small nuclear ribonucleoprotein-associated protein.
    
 0.899
R0F788_9BRAS
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.826
R0HHM0_9BRAS
Uncharacterized protein.
    
 0.826
R0I5X6_9BRAS
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.826
R0IDH7_9BRAS
N-acetyltransferase domain-containing protein.
      
 0.772
R0IPA9_9BRAS
Uncharacterized protein.
      
 0.772
R0IPP4_9BRAS
Uncharacterized protein.
      
 0.760
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.