Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
R0FDA1_9BRAS | R0FQA8_9BRAS | R0FDA1 | R0FQA8 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | Uncharacterized protein. | 0.775 |
R0FDA1_9BRAS | R0FV63_9BRAS | R0FDA1 | R0FV63 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.925 |
R0FDA1_9BRAS | R0GFC7_9BRAS | R0FDA1 | R0GFC7 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | HTH La-type RNA-binding domain-containing protein. | 0.910 |
R0FDA1_9BRAS | R0GUK2_9BRAS | R0FDA1 | R0GUK2 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. | 0.925 |
R0FDA1_9BRAS | R0GZG1_9BRAS | R0FDA1 | R0GZG1 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. | 0.953 |
R0FDA1_9BRAS | R0H5Z8_9BRAS | R0FDA1 | R0H5Z8 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | Uncharacterized protein. | 0.891 |
R0FDA1_9BRAS | R0HUP7_9BRAS | R0FDA1 | R0HUP7 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | RPOLA_N domain-containing protein. | 0.997 |
R0FDA1_9BRAS | R0HUS3_9BRAS | R0FDA1 | R0HUS3 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | Uncharacterized protein; Belongs to the argonaute family. | 0.882 |
R0FDA1_9BRAS | R0I4A9_9BRAS | R0FDA1 | R0I4A9 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | Uncharacterized protein. | 0.939 |
R0FDA1_9BRAS | R0I8S9_9BRAS | R0FDA1 | R0I8S9 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. | 0.964 |
R0FQA8_9BRAS | R0FDA1_9BRAS | R0FQA8 | R0FDA1 | Uncharacterized protein. | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | 0.775 |
R0FQA8_9BRAS | R0GFC7_9BRAS | R0FQA8 | R0GFC7 | Uncharacterized protein. | HTH La-type RNA-binding domain-containing protein. | 0.778 |
R0FQA8_9BRAS | R0GUK2_9BRAS | R0FQA8 | R0GUK2 | Uncharacterized protein. | Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. | 0.927 |
R0FQA8_9BRAS | R0GZG1_9BRAS | R0FQA8 | R0GZG1 | Uncharacterized protein. | Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. | 0.999 |
R0FQA8_9BRAS | R0H5Z8_9BRAS | R0FQA8 | R0H5Z8 | Uncharacterized protein. | Uncharacterized protein. | 0.877 |
R0FQA8_9BRAS | R0HUP7_9BRAS | R0FQA8 | R0HUP7 | Uncharacterized protein. | RPOLA_N domain-containing protein. | 0.425 |
R0FQA8_9BRAS | R0HUS3_9BRAS | R0FQA8 | R0HUS3 | Uncharacterized protein. | Uncharacterized protein; Belongs to the argonaute family. | 0.862 |
R0FQA8_9BRAS | R0I4A9_9BRAS | R0FQA8 | R0I4A9 | Uncharacterized protein. | Uncharacterized protein. | 0.883 |
R0FQA8_9BRAS | R0I8S9_9BRAS | R0FQA8 | R0I8S9 | Uncharacterized protein. | Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. | 0.883 |
R0FV63_9BRAS | R0FDA1_9BRAS | R0FV63 | R0FDA1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | 0.925 |
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