STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugd_2UDP-glucose 6-dehydrogenase. (454 aa)    
Predicted Functional Partners:
rfbB
Nucleotide sugar epimerase.
  
 0.980
strE
NAD-dependent epimerase/dehydratase.
 
 0.927
galE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.915
tuaD
Nucleotide sugar dehydrogenase.
     
 
0.900
CUP24374.1
Capsular polysaccharide biosynthesis protein Cps4K.
  
 
 0.771
CUP38970.1
NAD-dependent epimerase/dehydratase.
  
 
 0.771
CUP46721.1
Capsular polysaccharide biosynthesis protein Cps4K.
  
 
 0.771
arnB_1
DegT/DnrJ/EryC1/StrS aminotransferase.
  
  
 0.676
rffG_2
Putative dTDP-glucose 4%2C6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.628
rmlA2
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.571
Your Current Organism:
Bacteroides uniformis
NCBI taxonomy Id: 820
Other names: ATCC 8492, B. uniformis, CCUG 4942, CIP 103695, DSM 6597, JCM 5828, NCTC 13054
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