STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP79205.1alpha-1%2C2-mannosidase. (775 aa)    
Predicted Functional Partners:
CUP79185.1
L-glutaminase.
 
     0.820
CUP79164.1
Uncharacterised protein.
       0.600
xynD_3
Arabinan endo-1%2C5-alpha-L-arabinosidase A.
     0.584
CUP79292.1
Uncharacterized conserved protein.
  
 0.521
CUP79310.1
Uncharacterized protein conserved in bacteria.
 
    0.512
CUP79137.1
Protein of uncharacterised function (DUF3823).
  
    0.403
Your Current Organism:
Bacteroides uniformis
NCBI taxonomy Id: 820
Other names: ATCC 8492, B. uniformis, CCUG 4942, CIP 103695, DSM 6597, JCM 5828, NCTC 13054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.