STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sapBUncharacterized membrane protein. (223 aa)    
Predicted Functional Partners:
mltD_1
Lytic transglycosylase catalytic.
       0.718
CUP66598.1
Calcium-translocating P-type ATPase%2C PMCA-type.
  
 
 0.663
rcsC_3
PAS domain S-box.
 
  
 0.640
CUP23809.1
Uncharacterized conserved protein.
  
  
 0.613
CUQ23989.1
Acid-resistance membrane protein.
  
  
 0.613
CUP99313.1
Short-chain dehydrogenase/reductase SDR.
       0.597
CUP99342.1
Uncharacterized conserved protein.
     
 0.592
rhaS_2
AraC family transcriptional regulator.
 
 
 0.434
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 
 0.410
ygaD
CinA domain protein; Belongs to the CinA family.
  
  
 0.403
Your Current Organism:
Bacteroides uniformis
NCBI taxonomy Id: 820
Other names: ATCC 8492, B. uniformis, CCUG 4942, CIP 103695, DSM 6597, JCM 5828, NCTC 13054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.