STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywqN_2NADPH-dependent FMN reductase. (182 aa)    
Predicted Functional Partners:
CUQ26339.1
Uncharacterized conserved protein.
       0.752
otsA
Bifunctional trehalose-6-phosphate synthase/HAD hydrolase.
   
  
 0.588
CUP36879.1
4Fe-4S ferredoxin.
 
   
 0.544
nreC_2
Transcriptional regulator%2C LuxR family.
     
 0.511
rteB
Two-component system response regulator.
     
 0.502
arcB_2
Signal transduction histidine kinase.
     
 0.497
dps
Ferritin; Belongs to the Dps family.
  
  
 0.462
CUQ12920.1
Cell surface protein.
   
  
 0.430
CUP45365.1
C_GCAxxG_C_C family protein.
 
     0.415
Your Current Organism:
Bacteroides uniformis
NCBI taxonomy Id: 820
Other names: ATCC 8492, B. uniformis, CCUG 4942, CIP 103695, DSM 6597, JCM 5828, NCTC 13054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.