STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ29149.1AraC family transcriptional regulator. (307 aa)    
Predicted Functional Partners:
btr_3
AraC family transcriptional regulator.
  
     0.693
soxS_1
AraC family transcriptional regulator.
  
     0.682
CUQ23055.1
Transcriptional regulator.
  
     0.610
CUP41629.1
AraC family transcriptional regulator.
  
     0.589
rhaS_2
AraC family transcriptional regulator.
  
  
 0.585
rhaS_1
Histidine kinase.
  
  
 0.515
ydcR
GntR family transcriptional regulator.
  
  
 0.490
cbiO
ABC transporter related protein.
       0.457
CUQ29176.1
Putative transmembrane protein.
       0.457
CUQ29199.1
Uncharacterised protein.
       0.443
Your Current Organism:
Bacteroides uniformis
NCBI taxonomy Id: 820
Other names: ATCC 8492, B. uniformis, CCUG 4942, CIP 103695, DSM 6597, JCM 5828, NCTC 13054
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.