STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG91297.1ABC 3 transport family protein; KEGG: pfe:PSF113_0030 1.5e-24 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00. (270 aa)    
Predicted Functional Partners:
KXG91296.1
KEGG: fma:FMG_0024 7.5e-53 putative zinc ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.995
KXG91295.1
ABC transporter, substrate-binding protein; KEGG: sah:SaurJH1_2478 4.2e-27 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 9.68; Belongs to the bacterial solute-binding protein 9 family.
 
 0.993
KXG89184.1
KEGG: fma:FMG_0226 4.8e-58 zinc ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.993
KXG89183.1
ABC transporter, substrate-binding protein; KEGG: sah:SaurJH1_2478 1.4e-13 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 8.78; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.971
KXG89182.1
Hypothetical protein; KEGG: sah:SaurJH1_2478 8.0e-14 ribulose-phosphate 3-epimerase K01783.
  
 
 0.748
KXG91298.1
Hypothetical protein.
     
 0.581
KXG91299.1
ABC-2 type transporter; KEGG: apb:SAR116_0895 0.0014 ABC protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.569
KXG89384.1
Iron dependent repressor, DNA binding domain protein; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.559
KXG88575.1
Metal ion transporter, metal ion transporter family; KEGG: hiq:CGSHiGG_02375 5.7e-12 argininosuccinate synthase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.551
KXG89185.1
ABC 3 transport family protein; KEGG: pfe:PSF113_0030 1.0e-25 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.470
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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