STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG91300.1ABC transporter, ATP-binding protein; KEGG: gth:Geoth_0298 7.2e-71 Teichoic-acid-transporting ATPase K09691; Psort location: CytoplasmicMembrane, score: 9.51. (409 aa)    
Predicted Functional Partners:
KXG91299.1
ABC-2 type transporter; KEGG: apb:SAR116_0895 0.0014 ABC protein; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
KXG91301.1
KEGG: efc:EFAU004_01972 2.8e-29 glycosyl transferase group 2 family protein; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.814
KXG91302.1
KEGG: aur:HMPREF9243_0774 3.0e-26 glycosyltransferase group 2 family protein; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.792
KXG91303.1
Glycosyltransferase, group 2 family protein; KEGG: bsr:I33_3547 7.3e-23 YveT; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.792
KXG88864.1
Hypothetical protein; KEGG: apb:SAR116_1919 9.7e-07 competence protein F.
   
    0.614
xerC
Phage integrase, SAM-like domain protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
   
    0.516
KXG90874.1
Hypothetical protein; KEGG: rop:ROP_39720 3.7e-28 glycosyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.477
KXG90498.1
KEGG: ols:Olsu_0828 9.0e-160 UDP-galactopyranose mutase K01854; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.463
KXG91242.1
Acyltransferase; KEGG: reh:H16_A1866 1.0e-32 h16_A1866; acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.405
pyrR
Pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
       0.400
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.