STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrBKEGG: ols:Olsu_0992 2.1e-144 aspartate carbamoyltransferase K00609; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (311 aa)    
Predicted Functional Partners:
pyrR
Pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
 
 0.999
KXG91306.1
Putative dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
 0.999
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.941
pyrD
Putative dihydroorotate oxidase, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
  
 
 0.936
KXG90818.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
   
0.925
KXG89530.1
Carbamate kinase; KEGG: eyy:EGYY_18950 2.6e-98 hypothetical protein; K00926 carbamate kinase; Psort location: Cytoplasmic, score: 7.50.
    
 0.925
KXG89411.1
Aminotransferase, class I/II; KEGG: ols:Olsu_0095 2.7e-126 class I and II aminotransferase; K11358 aspartate aminotransferase; Psort location: Cytoplasmic, score: 7.50.
    
  0.920
asnA
Aspartate--ammonia ligase; KEGG: ctc:CTC00781 4.4e-103 asparagine synthetase AsnA K01914; Psort location: Cytoplasmic, score: 10.00.
     
 0.906
KXG89181.1
L-asparaginase, type I; KEGG: cgo:Corgl_0285 1.6e-105 asparaginase K01424; Psort location: Cytoplasmic, score: 9.97.
     
 0.906
KXG91362.1
Putative uracil permease; KEGG: hiq:CGSHiGG_01870 2.3e-74 upp; uracil phosphoribosyltransferase K02824; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.904
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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