STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG91328.1KEGG: ols:Olsu_0971 7.3e-39 undecaprenol kinase K00901; Psort location: CytoplasmicMembrane, score: 10.00. (125 aa)    
Predicted Functional Partners:
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.936
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
 
  0.920
uppP
Putative undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
     
 0.917
KXG91227.1
KEGG: ols:Olsu_0900 1.6e-82 phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.806
era
Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
    0.717
KXG91326.1
Putative PhoH-like protein; KEGG: cnc:CNE_1c05490 4.2e-59 phoH; phosphate starvation-inducible protein PhoH K06217; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.683
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
  
 0.643
KXG88556.1
PAP2 family protein; KEGG: gfo:GFO_1226 3.5e-23 PAP2 (2 phosphatidic acid phosphatase) family protein K01112; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.598
KXG90594.1
KEGG: clo:HMPREF0868_0486 4.2e-82 glycosyltransferase group 2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
  0.554
KXG91325.1
tRNA methylthiotransferase YqeV; KEGG: cth:Cthe_0150 2.2e-69 RNA modification protein; K08070 2-alkenal reductase; Psort location: Cytoplasmic, score: 7.50.
     
 0.539
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.