STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG91339.1KEGG: apv:Apar_0782 1.1e-51 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (226 aa)    
Predicted Functional Partners:
KXG91340.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 2.3e-16 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: CytoplasmicMembrane, score: 9.55; Belongs to the CinA family.
 
  
 0.986
KXG91227.1
KEGG: ols:Olsu_0900 1.6e-82 phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.953
KXG91371.1
KEGG: ols:Olsu_0935 2.9e-67 CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
0.942
KXG91338.1
Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.808
KXG88565.1
HAD hydrolase, family IB; KEGG: mej:Q7A_31 1.7e-16 phosphoserine phosphatase; Psort location: CytoplasmicMembrane, score: 8.16.
  
 
 0.793
KXG91336.1
Hypothetical protein; KEGG: cjk:jk0707 0.0084 aceF; dihydrolipoamide acetyltransferase K00658; Psort location: CytoplasmicMembrane, score: 9.55.
  
    0.792
KXG88556.1
PAP2 family protein; KEGG: gfo:GFO_1226 3.5e-23 PAP2 (2 phosphatidic acid phosphatase) family protein K01112; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.555
KXG89406.1
KEGG: hdn:Hden_2415 4.5e-46 dihydropteroate synthase K00796; Psort location: Cytoplasmic, score: 7.50.
     
 0.545
KXG91335.1
FtsK/SpoIIIE family protein; KEGG: reh:H16_A1582 1.1e-106 h16_A1582; DNA translocase FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.535
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
     
 0.523
Your Current Organism:
Atopobium vaginae
NCBI taxonomy Id: 82135
Other names: A. vaginae, ATCC BAA-55, ATCC:BAA 55, ATCC:BAA:55, CCUG 38953, CIP 106431, DSM 15829, NCTC 13935
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